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SRX22480185: Hi-C sequencing of LA1589
1 ILLUMINA (Illumina NovaSeq 6000) run: 428.4M spots, 128.5G bases, 38Gb downloads

Design: Hi-C sequencing of of S. pimpinellifolium
Submitted by: Shandong Agricultural University
Study: Solanum pimpinellifolium cultivar:LA1589 Genome sequencing and assembly
show Abstracthide Abstract
Wild species have commonly been used as a source for disease resistance and quality improvement in most crops. Solanum pimpinellifolium, the most closely related wild species of tomato, has high breeding potential for use in breeding programs aimed at developing multi-pathogen resistance and quality improvement. In this study, we assembled a high-quality and well-annotated chromosome-level genome for S. pimpinellifolium LA1589. The annotated genome sequence serves as a fundamental genetic resource for studying functional genomics.
Sample:
SAMN38196464 • SRS19493696 • All experiments • All runs
Library:
Name: Hi-C
Instrument: Illumina NovaSeq 6000
Strategy: Hi-C
Source: GENOMIC
Selection: Restriction Digest
Layout: PAIRED
Runs: 1 run, 428.4M spots, 128.5G bases, 38Gb
Run# of Spots# of BasesSizePublished
SRR26781974428,419,258128.5G38Gb2023-11-10

ID:
30465974

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